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Gene Expression Omnibus Announcements & Study Releases
Announcements of updates and changes to the Gene Expression Omnibus (GEO) databases and notifications of newly released functional genomic studies.
- GSE296374 Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [snRNA-Seq] April 19, 2026Contributors : Jungeun Ji ; Jinhee Baek ; Kyoung-Doo Hwang ; Seunghwan Choi ; Junko Kasuya ; Ted Abel ; Joon-Yong An ; Yong-Seok LeeSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusThe cerebellum has recently been recognized for its role in non-motor functions, including classical fear conditioning. However, the molecula […]
- GSE296509 Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning April 19, 2026Series Type : Expression profiling by high throughput sequencing ; OtherOrganism : Mus musculusThis SuperSeries is composed of the SubSeries listed below.
- GSE296375 Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics] April 19, 2026Contributors : Jungeun Ji ; Jinhee Baek ; Kyoung-Doo Hwang ; Seunghwan Choi ; Junko Kasuya ; Ted Abel ; Joon-Yong An ; Yong-Seok LeeSeries Type : OtherOrganism : Mus musculusThe cerebellum has recently been recognized for its role in non-motor functions, including classical fear conditioning. However, the molecular mechanisms underlying non-motor learning an […]
- GSE296992 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [RNA-seq of early embryo] April 19, 2026Contributors : Ryo Maeda ; Shunsuke Kuroki ; Azusa Inoue ; Makoto TachibanaSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusMinor zygotic genome activation (ZGA) is crucial for early development and totipotency acquisition, yet the regulatory mechanisms driving minor ZGA genes remain elusive. Here we show that dynamic re […]
- GSE296991 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [CATCH-seq of early embryo] April 19, 2026Contributors : Ryo Maeda ; Shunsuke Kuroki ; Masahiro Matsuwaka ; Azusa Inoue ; Makoto TachibanaSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusMinor zygotic genome activation (ZGA) is crucial for early development and totipotency acquisition, yet the regulatory mechanisms driving minor ZGA genes remain el […]
- GSE296994 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation April 19, 2026Series Type : Expression profiling by high throughput sequencing ; Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusThis SuperSeries is composed of the SubSeries listed below.
- GSE296993 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [RNA-seq of mESC] April 19, 2026Contributors : Ryo Maeda ; Makoto TachibanaSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusMinor zygotic genome activation (ZGA) is crucial for early development and totipotency acquisition, yet the regulatory mechanisms driving minor ZGA genes remain elusive. Here we show that dynamic regulation of H3K9me2 is essential […]
- GSE314875 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [ChIP-seq of mESC] April 19, 2026Contributors : Ryo Maeda ; Makoto TachibanaSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusMinor zygotic genome activation (ZGA) is crucial for early development and totipotency acquisition, yet the regulatory mechanisms driving minor ZGA genes remain elusive. Here we show that dynamic regulation of H3K9me […]
- GSE297574 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [spike-in ChIP-seq of mESC] April 19, 2026Contributors : Ryo Maeda ; Makoto TachibanaSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusMinor zygotic genome activation (ZGA) is crucial for early development and totipotency acquisition, yet the regulatory mechanisms driving minor ZGA genes remain elusive. Here we show that dynamic regulation of H3K9me […]
- GSE324772 Single-cell atlas of black rockfish (Sebastes schlegelii) ovarian stroma across reproductive states April 19, 2026Series Type : Expression profiling by high throughput sequencingOrganism : Sebastes schlegeliiThis project contains single-cell RNA sequencing (scRNA-seq) data of the ovarian stroma from the viviparous teleost, black rockfish (Sebastes schlegelii). To define how the ovarian stroma is reprogrammed across reproduction, we profiled stromal cells spanning three […]
- GSE327941 Exploring the immune environment of glioblastoma in humanized mouse models April 19, 2026Contributors : Jun Takei ; Ken Furudate ; Satoru Osuka ; Masakazu KamataSeries Type : Expression profiling by high throughput sequencingOrganism : Homo sapiensGlioblastoma (GBM) is the deadliest primary brain tumor in adults, and progress in therapy development has been hindered by the lack of preclinical models that faithfully recapitulate interactions betw […]
- GSE327989 Comparative Study of Phycoerythrobilin Synthases for Fine-Tuning Photosynthetic Light-Harvesting Complexes, Phycobilisomes April 19, 2026Contributors : Satoru Watanabe ; Kaori Nimura-MatsuneSeries Type : Expression profiling by high throughput sequencingOrganism : Synechococcus elongatus PCC 7942 = FACHB-805Phycobilisomes serve as the major light-harvesting antenna complexes in cyanobacteria; they capture light and transfer excitation energy to the photosystems, and their spectral and functio […]
- GSE328020 Effects of LXR intervention on transcriptome expression in the injury area of mice with spinal cord injury April 19, 2026Series Type : Expression profiling by high throughput sequencingOrganism : Mus musculusSpinal cord injury (SCI) induces extensive myelin breakdown and releases large amounts of lipids into the lesion microenvironment, driving macrophage-to-foam cell transformation and sustaining chronic inflammation. Reverse cholesterol transport (RCT) is the major pathway r […]
- GSE328037 Assay for Transposase-Accessible Chromatin With High-Throughput Sequencing in Mouse BMDMs Following CD74 Deficiency April 19, 2026Contributors : Rui Peng ; Bo Yu ; Lutian Yao ; Lei Zhang ; Tao GuiSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusWe employed ACAT-Seq technology to perform a genome-wide assessment of chromatin accessibility changes following CD74 knockout in mouse bone marrow-derived macrophages (BMDMs), with a focus on […]